CDS

Accession Number TCMCG007C04218
gbkey CDS
Protein Id XP_009122703.1
Location complement(join(20222890..20223037,20223179..20223285,20223379..20223498,20223711..20223764,20223881..20223901,20223998..20224052,20224138..20224285,20224447..20225064,20225157..20225281,20225367..20225486,20225573..20225736))
Gene LOC103847382
GeneID 103847382
Organism Brassica rapa

Protein

Length 559aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009124455.3
Definition protein PTST homolog 3, chloroplastic isoform X3 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category K
Description transcription factor-like protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03000        [VIEW IN KEGG]
KEGG_ko ko:K04683        [VIEW IN KEGG]
ko:K09392        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04110        [VIEW IN KEGG]
ko04350        [VIEW IN KEGG]
map04110        [VIEW IN KEGG]
map04350        [VIEW IN KEGG]
GOs GO:0000082        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000981        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006261        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0042023        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044770        [VIEW IN EMBL-EBI]
GO:0044772        [VIEW IN EMBL-EBI]
GO:0044786        [VIEW IN EMBL-EBI]
GO:0044843        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046982        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGACTTTGTCTTTTATCTCCTTGGCTTCCTTTCACAATCGGAGGAATCCAATGTTCTACCATCACCTTCATCAGCAGCAACGGCAACTTCTTTTTGTTACCCGTTTGCAGAAGAAGAACAATAGTTTCGTTTGTTTCGCTTGTTCCATCAAACAAACCAGAGTTCGTAAGAGAGTGAAGAGCAACGAGGAGCTTCGGAGTGAGATTCTGGAGTTCGTTGCTTCGGCTGGGCTTCCTCCAGGTCACGTGCCTTCCATGAAGGAACTCACTGCACGGGAAAGAGTTGATCTTGCAAACGTTGTCAGACGAAGAGGGTATAAGTTCATCAGAGAGCTTCTTGCAAGCTCTGAAGACTGTAATGAGCTTACTAGTCCAAGTGGCGTCTCTTTGGAAGATTCTTTAACAGAAGGTCAGGACGAAGAAGCACTTGAATCTACCGAACCACCTTCAAGCAGTGAGATGTACTCTACTGAAACAGATGCTAGTGTCTCCCTTGATCAGAGAGCAGATAGTTTTCCAGAGGAAGTTGATGTAGGGAAGTCAAGTCCCGAGGCTGAAGAATGTGGAAGTGTGAGTCAAGAAGAATCTTCGTTGGCTGCAGTTTCGAGCATGGAAAGTTCCATTTCAGACTTGGGTGACAGTAACCATTCAGCAGGAATCACAGAAAGTAATTTACAGATTGAGAGCGTGGAGCTCAGTAATGTAGCTGACACTGAATCCTCTTCTTCCGAAGCTTCGACATCCGAAGATGATACTTTAAGCTCTTCAGAGAGAGAAGCTGACAATGTTTTGGTGACAGAGGAGGATGAGGAGGTCAATGATGTGGACGAGGATTCCTCTCTTGCCTATGATCATTACACCAGTCAAGATCTCAATCACACCGAACATGTTGTTGAAAGTGTTGCTACTGAATCCTTGTCTGGTGATAAGGATTGGATGTTAGGACTTTCTTCTTCAACTTCAAGCATAGAAGAAAAAACAACCAGATTTCTCCAGAACGGGTACTTAGATACAGTTGAGGATGTTTCAGATAATGAAAGCAGTCCCGAAGAAACAACCAAAGGTGGTGAGTACAGTCATGGTGGTCAGAGAAGTGTGAGTGTGGCGCCAAATGGAAGTGCCCTAGCATATGAGGAGGTTACCTATGCGACAGAAGCTAATAACTCTCAAAGGAATAGGGATCAGAGATATGGGAACGCTGAACTTGACAAGGATTCACATGATGAGACAATGAAACGGGAAAATCAGCGTCAGAAAGAGCTGGAGCTGTCAAGGTTAAAAGAGCAGATTGAAAAGGAAAAGCTGTCTCTTTCGGTTCTTCAAAGAAAAGCTGAAACAGAGATACAAAAGGCCCAAATGCTTGTCTTACAGAAGGATGTTGAGTTGCAAGAAGCCGAGGAAAGTCTCTCAGGACTGCAAGAGGTTGAGATTGAATATTGTGGCGATGGTAATGTTGTGGAGGTGACTGGCAGCTTCAACGGCTGGGAACACCGAGTGGGACTGGAGCTTGAAGCATCCAAGTCAACCGGGAAACAGAAATGCTGGTCAACATTACTGTGGTTATATCCTGGTACATATGAGATTAAGTTCATCGTGGACGGTCAATGGATAACTGATCCCCAAAGAGATTCGGTTACAAGAGGACACATCACAAACAACATTCTCAAAGTAGACTGA
Protein:  
MATLSFISLASFHNRRNPMFYHHLHQQQRQLLFVTRLQKKNNSFVCFACSIKQTRVRKRVKSNEELRSEILEFVASAGLPPGHVPSMKELTARERVDLANVVRRRGYKFIRELLASSEDCNELTSPSGVSLEDSLTEGQDEEALESTEPPSSSEMYSTETDASVSLDQRADSFPEEVDVGKSSPEAEECGSVSQEESSLAAVSSMESSISDLGDSNHSAGITESNLQIESVELSNVADTESSSSEASTSEDDTLSSSEREADNVLVTEEDEEVNDVDEDSSLAYDHYTSQDLNHTEHVVESVATESLSGDKDWMLGLSSSTSSIEEKTTRFLQNGYLDTVEDVSDNESSPEETTKGGEYSHGGQRSVSVAPNGSALAYEEVTYATEANNSQRNRDQRYGNAELDKDSHDETMKRENQRQKELELSRLKEQIEKEKLSLSVLQRKAETEIQKAQMLVLQKDVELQEAEESLSGLQEVEIEYCGDGNVVEVTGSFNGWEHRVGLELEASKSTGKQKCWSTLLWLYPGTYEIKFIVDGQWITDPQRDSVTRGHITNNILKVD